BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B08LP1|AL425812
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1470 1542 0.0
>3x_Contig1470
Length = 8270
Score = 1542 bits (777), Expect = 0.0
Identities = 794/798 (99%), Gaps = 3/798 (0%)
Strand = Plus / Plus
Query: 1 acatccgctaagcttacttctaaggaacaaaactgtataatgagatgttcagaaaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4824 acatccgctaagcttacttctaaggaacaaaactgtataatgagatgttcagaaaagttc 4883
Query: 61 ttgaaacacagtgaacgtgtgggtcaacgtttccaagagcaaaatgctgccatgaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4884 ttgaaacacagtgaacgtgtgggtcaacgtttccaagagcaaaatgctgccatgaatcaa 4943
Query: 121 accatgggtcgttaaaaggtttaaagaagaaattctccctaccaacctcaaattttattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4944 accatgggtcgttaaaaggtttaaagaagaaattctccctaccaacctcaaattttattc 5003
Query: 181 tgtacatacttcattatattataacattatattataacattatatcataacattttatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5004 tgtacatacttcattatattataacattatattataacattatatcataacattttatcg 5063
Query: 241 tagctactacgattaccatagattttaaggactatctctcccatgtatattcattctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5064 tagctactacgattaccatagattttaaggactatctctcccatgtatattcattctgtt 5123
Query: 301 tctgtatatag-aaaggtttgcatttcattgccatatgactggccaaaaaaagatgctcc 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5124 tctgtatatagaaaaggtttgcatttcattgccatatgactggccaaaaaaagatgctcc 5183
Query: 360 tcagacacaaggtaatcggtattgtgttatctgcgtaagttgcagactccctgcattgca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5184 tcagacacaaggtaatcggtattgtgttatctgcgtaagttgcagactccctgcattgca 5243
Query: 420 ctcaactaggcattgtcgtaaatgacaagctaaactgtccgtccgttgtccctcccatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5244 ctcaactaggcattgtcgtaaatgacaagctaaactgtccgtccgttgtccctcccatgt 5303
Query: 480 cacgtggtctccattagagaagaactggcgacttgatttattataacaacgacaataggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5304 cacgtggtctccattagagaagaactggcgacttgatttattataacaacgacaataggg 5363
Query: 540 ctcaagctgaagttccattagaaacaaccttctcacgaagcgaaaatcccgtta--gatt 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5364 ctcaagctgaagttccattagaaacaaccttctcacgaagcgaaaatcccgttagggatt 5423
Query: 598 tgcttgattatwactcaccgggggtttgaaccctcggcgagcggacagctgcgttccacc 657
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5424 tgcttgattataactcaccgggggtttgaaccctcggcgagcggacagctgcgttccacc 5483
Query: 658 gaatttcccacctggaatgaggagaacaactcctctgatcaagtagaacattcaaatcac 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5484 gaatttcccacctggaatgaggagaacaactcctctgatcaagtagaacattcaaatcac 5543
Query: 718 atgacctcttctcaaaacacttcaaagtaacgagcatccaccttatacttaagagtgaat 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5544 atgacctcttctcaaaacacttcaaagtaacgagcatccaccttatacttaagagtgaat 5603
Query: 778 attctttgaagcgcttca 795
||||||||||||||||||
Sbjct: 5604 attctttgaagcgcttca 5621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5577
Number of Sequences: 1807
Number of extensions: 5577
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)